tag:blogger.com,1999:blog-7340015377021158900.post6393884002254149206..comments2023-06-21T00:57:14.477-07:00Comments on Debian in Biology and Medicine: Community efforts towards research on EHECUnknownnoreply@blogger.comBlogger1125tag:blogger.com,1999:blog-7340015377021158900.post-55037459001828082742011-06-06T10:31:35.996-07:002011-06-06T10:31:35.996-07:00Prof. Kurtz kindly pointed me to the MOSAIC databa...Prof. Kurtz kindly pointed me to the MOSAIC database (http://genome.jouy.inra.fr/mosaic/) to which one of his tools had contributed that is now substituted by CoCoNUT (http://toolcoconut.org/, http://www.biomedcentral.com/1471-2105/9/476). MOSAIC is just sadly last curated in 2010, otherwise the community effort could possibly end just there. So we'd need to perform those runs ourselves, just CoCoNUT we cannot redistribute with its current license and it will take too long to be clarified.<br /><br />To the creation of MOSAIC contributed a second tool MAUVE (http://asap.ahabs.wisc.edu/mauve/mauve-developer-guide/compiling-mauvealigner-from-source.html). This looks also real nice. I will be investigating to prepare it as a package over the next couple of days.<br /><br />More ideas? Just drop them here, please.shttps://www.blogger.com/profile/05382439350805346216noreply@blogger.com